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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs12170958 chr22:43374191 A/G RBX1 chr22:41347351-41369313:+ -0.86 -7.5 4.61E-13 Box Plot
BLCA rs12170958 chr22:43374191 A/G XRCC6 chr22:42017123-42060052:+ -0.72 -6.63 1.17E-10 Box Plot
BLCA rs12173982 chr6:26625651 G/C ZNF322B chr9:99957633-99961910:- 0.52 9.3 1.1E-18 Box Plot
BLCA rs1217645 chr8:4298177 A/C AGPAT5 chr8:6565878-6617187:+ -0.67 -6.56 1.76E-10 Box Plot
BLCA rs1217645 chr8:4298177 A/C CCDC25 chr8:27590828-27630170:- -0.67 -6.13 2.14E-9 Box Plot
BLCA rs1217645 chr8:4298177 A/C CNOT7 chr8:17082473-17104387:- -0.71 -6.76 5.08E-11 Box Plot
BLCA rs1217645 chr8:4298177 A/C KIAA1967 chr8:22462257-22477981:+ -0.66 -6.12 2.3E-9 Box Plot
BLCA rs1217645 chr8:4298177 A/C MTMR9 chr8:11141925-11185655:+ -0.62 -6.41 4.3E-10 Box Plot
BLCA rs1217645 chr8:4298177 A/C TNKS chr8:9413424-9639856:+ -0.58 -6.58 1.51E-10 Box Plot
BLCA rs12185869 chr21:38500710 C/G LZTFL1 chr3:45864808-45957534:- -0.31 -6.09 2.67E-9 Box Plot
BLCA rs12185870 chr21:38500689 G/C LZTFL1 chr3:45864808-45957534:- -0.31 -6.09 2.67E-9 Box Plot
BLCA rs12187932 chr5:176643151 C/T LOC388955 chr2:63849182-63850159:- -0.29 -6.63 1.15E-10 Box Plot
BLCA rs12194844 chr6:26762230 T/C ZNF322B chr9:99957633-99961910:- -0.44 -6.57 1.68E-10 Box Plot
BLCA rs12198317 chr6:170819289 T/C CT47A9 chrX:120077415-120080737:- 0.2 6.92 1.96E-11 Box Plot
BLCA rs12201680 chr6:170826467 T/G CT47A9 chrX:120077415-120080737:- 0.2 6.88 2.4E-11 Box Plot